Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| translocation/assembly module tamb domain-containing protein | M5M_RS14070 | P39321 | + | 3114205 - 3117735 | 128474.0 |
| phosphatase pap2 family protein | M5M_RS14075 | Not Available | + | 3117810 - 3118340 | 19010.5 |
| glycosyltransferase family protein | M5M_RS14080 | Not Available | + | 3118353 - 3119540 | 43760.4 |
| nitrogen regulation protein nr(i) | M5M_RS14090 | Not Available | - | 3120055 - 3121485 | 52884.9 |
| nitrogen regulation protein nr(ii) | M5M_RS14095 | P06218 | - | 3121472 - 3122548 | 39654.8 |
| duf4124 domain-containing protein | M5M_RS14100 | Not Available | - | 3122747 - 3123277 | 19357.9 |
| glutamate--ammonia ligase | M5M_RS14105 | P15124 | - | 3123394 - 3124794 | 51363.5 |
| trna uracil 4-sulfurtransferase thii | M5M_RS14110 | Q21NG2 | + | 3125165 - 3126637 | 53910.0 |
| hypothetical protein | M5M_RS14115 | Not Available | - | 3126634 - 3127398 | 28247.2 |
| translational gtpase typa | M5M_RS14120 | P0A3B2 | + | 3127538 - 3129346 | 66571.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.