Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| terpene cyclase/mutase family protein | M5M_RS13970 | Not Available | - | 3096111 - 3097238 | 42542.0 |
| class i sam-dependent methyltransferase | M5M_RS13975 | G0FUS0 | - | 3097235 - 3097948 | 27405.1 |
| glycosyltransferase family 4 protein | M5M_RS13980 | C7QKE8 | - | 3097935 - 3099254 | 48559.5 |
| tonb-dependent receptor | M5M_RS13985 | Q9JZN9 | - | 3099485 - 3101518 | 74640.1 |
| hypothetical protein | M5M_RS13990 | Not Available | - | 3101573 - 3101863 | 10846.9 |
| stas domain-containing protein | M5M_RS13995 | Not Available | + | 3102036 - 3102350 | 11700.3 |
| imidazoleglycerol-phosphate dehydratase hisb | M5M_RS14000 | B3PGA1 | + | 3102439 - 3103032 | 21974.4 |
| imidazole glycerol phosphate synthase subunit hish | M5M_RS14005 | Q9HU42 | + | 3103033 - 3103674 | 23146.7 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | M5M_RS14010 | B3PGA3 | + | 3103716 - 3104444 | 25834.1 |
| imidazole glycerol phosphate synthase subunit hisf | M5M_RS14015 | B3PGA4 | + | 3104455 - 3105228 | 27200.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.