Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M5M_RS13775 | Not Available | - | 3059239 - 3059955 | 25900.8 |
| duf1415 domain-containing protein | M5M_RS13780 | Not Available | + | 3060125 - 3060694 | 20788.7 |
| carboxymuconolactone decarboxylase family protein | M5M_RS13785 | P20370 | + | 3060782 - 3061165 | 13958.8 |
| hypothetical protein | M5M_RS13790 | Not Available | - | 3061211 - 3061540 | 11481.1 |
| patatin-like phospholipase family protein | M5M_RS13795 | Not Available | - | 3061576 - 3063543 | 71999.2 |
| di-heme-cytochrome c peroxidase | M5M_RS13800 | Not Available | - | 3063540 - 3065804 | 84096.7 |
| di-heme-cytochrome c peroxidase | M5M_RS13805 | P55493 | - | 3065831 - 3067471 | 59622.8 |
| diguanylate cyclase | M5M_RS13810 | Not Available | + | 3067908 - 3069608 | 62562.4 |
| tfox/sxy family protein | M5M_RS13815 | Not Available | - | 3069948 - 3070277 | 12136.7 |
| dj-1/pfpi family protein | M5M_RS13820 | Q8G9F9 | - | 3070264 - 3070890 | 22716.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.