Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2860 family protein | M5M_RS13550 | Not Available | + | 3021055 - 3022047 | 36293.3 |
| copper resistance protein b | M5M_RS13555 | Not Available | - | 3022144 - 3022818 | 24986.3 |
| molybdopterin-dependent oxidoreductase | M5M_RS13560 | P61159 | + | 3022981 - 3025110 | 77431.9 |
| trna-uridine aminocarboxypropyltransferase | M5M_RS13565 | Not Available | + | 3025179 - 3025766 | 21836.4 |
| gnat family n-acetyltransferase | M5M_RS13570 | Not Available | + | 3025756 - 3026202 | 16222.7 |
| duf6164 family protein | M5M_RS13575 | Not Available | + | 3026183 - 3026524 | 12446.2 |
| metal-dependent hydrolase | M5M_RS13580 | Not Available | - | 3026535 - 3027554 | 37850.0 |
| atp-binding protein | M5M_RS13585 | Not Available | + | 3027621 - 3028844 | 46040.6 |
| mechanosensitive ion channel family protein | M5M_RS13590 | Q8K9B1 | + | 3028852 - 3029667 | 30029.3 |
| mosc domain-containing protein | M5M_RS13595 | Not Available | + | 3029664 - 3030152 | 17334.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.