Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rdd family protein | M5M_RS13250 | Not Available | + | 2944650 - 2945963 | 49222.9 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | M5M_RS13255 | Q02L76 | - | 2945950 - 2948250 | 85816.5 |
| lysr substrate-binding domain-containing protein | M5M_RS13260 | P0A9G0 | + | 2948349 - 2949299 | 35566.4 |
| duf3592 domain-containing protein | M5M_RS13265 | Not Available | + | 2949292 - 2951007 | 62806.8 |
| class i sam-dependent rrna methyltransferase | M5M_RS13270 | B5FEQ2 | + | 2951084 - 2952277 | 43667.9 |
| hypothetical protein | M5M_RS13275 | Not Available | + | 2952274 - 2953113 | 30738.6 |
| imelysin family protein | M5M_RS13280 | Not Available | - | 2953114 - 2954256 | 41655.8 |
| had family phosphatase | M5M_RS13285 | Q9I6F6 | - | 2954342 - 2954995 | 24648.3 |
| rna pyrophosphohydrolase | M5M_RS13290 | B3PIV4 | + | 2955114 - 2955611 | 19182.9 |
| phosphoenolpyruvate--protein phosphotransferase | M5M_RS13295 | P37178 | + | 2955625 - 2957877 | 82331.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.