Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chromosomal replication initiator protein dnaa | M5M_RS12210 | Q21PW4 | - | 2747373 - 2748797 | 53132.7 |
| 50s ribosomal protein l34 | M5M_RS19915 | Q31DI6 | + | 2749591 - 2749728 | 5150.49 |
| ribonuclease p protein component | M5M_RS12215 | A1U7J6 | + | 2749748 - 2750116 | 14163.4 |
| membrane protein insertion efficiency factor yidd | M5M_RS19920 | B3PIU2 | + | 2750123 - 2750359 | 8923.03 |
| membrane protein insertase yidc | M5M_RS12220 | B3PIU1 | + | 2750362 - 2752035 | 62277.4 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | M5M_RS12225 | A4VS81 | + | 2752078 - 2753436 | 48995.5 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | M5M_RS12230 | A4VS73 | + | 2754032 - 2755933 | 69678.4 |
| abc transporter transmembrane domain-containing protein | M5M_RS12235 | Q21DG3 | + | 2755991 - 2756579 | 21365.3 |
| para family protein | M5M_RS12240 | P0A149 | + | 2756631 - 2757428 | 28588.6 |
| parb/repb/spo0j family partition protein | M5M_RS12245 | P0A151 | + | 2757459 - 2758358 | 32491.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.