Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| quinone-dependent dihydroorotate dehydrogenase | M5M_RS01055 | B3PIL8 | + | 227093 - 228109 | 35795.3 |
| ribosome modulation factor | M5M_RS01060 | Q21JW8 | - | 228245 - 228448 | 7795.1 |
| bifunctional 23s rrna (guanine(2069)-n(7))-methyltransferase rlmk/23s rrna (guanine(2445)-n(2))-methyltransferase rlml | M5M_RS01065 | B3PIL6 | + | 228926 - 231094 | 81576.8 |
| pyridoxal phosphate-dependent aminotransferase | M5M_RS01070 | Not Available | - | 231067 - 232440 | 50589.0 |
| excinuclease abc subunit uvrb | M5M_RS01075 | P72174 | + | 232547 - 234535 | 74659.4 |
| bifunctional serine/threonine-protein kinase/formylglycine-generating enzyme family protein | M5M_RS19235 | Q8KY50 | - | 234554 - 236971 | 89265.0 |
| pp2c family serine/threonine-protein phosphatase | M5M_RS01085 | O34779 | - | 236981 - 237832 | 30369.7 |
| fha domain-containing protein | M5M_RS01090 | Not Available | + | 238030 - 238899 | 31189.3 |
| duf5610 domain-containing protein | M5M_RS01095 | Not Available | + | 238998 - 240074 | 38532.2 |
| glutaredoxin family protein | M5M_RS01100 | Not Available | + | 240127 - 240411 | 10228.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.