Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-j related domain-containing protein | M5M_RS19220 | Not Available | + | 186218 - 186862 | 23634.3 |
| methyltransferase | M5M_RS00865 | A3QHZ8 | - | 186831 - 187880 | 38423.0 |
| 16s rrna pseudouridine(516) synthase rsua | M5M_RS00870 | P65841 | - | 187909 - 188601 | 25542.8 |
| tetr/acrr family transcriptional regulator | M5M_RS00875 | Not Available | - | 188591 - 189304 | 26737.9 |
| coniferyl aldehyde dehydrogenase | M5M_RS00880 | Q9I6C8 | + | 189405 - 190841 | 52264.4 |
| pseudouridine synthase | M5M_RS00885 | Q87MD4 | - | 190838 - 191626 | 29690.5 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | M5M_RS00890 | B3PHG5 | - | 191663 - 192508 | 29589.0 |
| Trna-pro | Not Available | Not Available | + | 192734 - 192810 | Not Available |
| Trna-arg | Not Available | Not Available | + | 192849 - 192925 | Not Available |
| Trna-his | Not Available | Not Available | + | 192965 - 193040 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.