Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sodium ion-translocating decarboxylase subunit beta | M5M_RS00810 | Q9KTU5 | + | 177705 - 179009 | 44870.6 |
| degv family protein | M5M_RS00815 | Q8PGV3 | - | 179077 - 180018 | 35781.6 |
| chemotaxis protein chex | M5M_RS00820 | Not Available | - | 180160 - 180618 | 16057.3 |
| mbl fold metallo-hydrolase | M5M_RS00825 | Not Available | + | 180756 - 181640 | 31630.9 |
| glutathione s-transferase family protein | M5M_RS00830 | Q12390 | + | 181640 - 182254 | 22958.9 |
| hd-gyp domain-containing protein | M5M_RS00835 | Not Available | - | 182298 - 183671 | 51679.1 |
| lrp/asnc family transcriptional regulator | M5M_RS00840 | Not Available | - | 183761 - 184219 | 16939.3 |
| hd-gyp domain-containing protein | M5M_RS00845 | Not Available | - | 184254 - 185504 | 46670.1 |
| pyrimidine/purine nucleoside phosphorylase | M5M_RS00850 | A1SZG8 | - | 185593 - 185874 | 10401.3 |
| Trna-asn | Not Available | Not Available | + | 185951 - 186025 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.