Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| spy/cpxp family protein refolding chaperone | M5M_RS00760 | Not Available | + | 164185 - 164676 | 18401.7 |
| polysaccharide lyase family 7 protein | M5M_RS20900 | Not Available | - | 164740 - 166038 | 48008.7 |
| abgt family transporter | M5M_RS00770 | Not Available | + | 166791 - 168395 | 56657.9 |
| dead/deah box helicase | M5M_RS00775 | P44701 | - | 168439 - 169809 | 50212.6 |
| ybjn domain-containing protein | M5M_RS00780 | P0AAY8 | + | 170184 - 170663 | 17430.3 |
| nad(p)/fad-dependent oxidoreductase | M5M_RS00785 | Q3MHH6 | - | 170994 - 172574 | 57020.4 |
| abc transporter transmembrane domain-containing protein | M5M_RS00790 | Q92GP9 | - | 172618 - 174465 | 66487.6 |
| trna-dihydrouridine synthase | M5M_RS00795 | Q88LF2 | - | 174510 - 175502 | 36401.9 |
| oadg family protein | M5M_RS00800 | Not Available | + | 175640 - 175873 | 8168.25 |
| sodium-extruding oxaloacetate decarboxylase subunit alpha | M5M_RS00805 | Q03030 | + | 175910 - 177694 | 64342.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.