Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase, carboxyltransferase subunit beta | M5M_RS00610 | B3PFP1 | + | 134881 - 135744 | 31573.0 |
| folylpolyglutamate synthase/dihydrofolate synthase family protein | M5M_RS00615 | P08192 | + | 135744 - 137018 | 45099.2 |
| spor domain-containing protein | M5M_RS00620 | Not Available | + | 137069 - 137629 | 20140.2 |
| cvpa family protein | M5M_RS00625 | P45108 | + | 137744 - 138250 | 18706.4 |
| amidophosphoribosyltransferase | M5M_RS00630 | Q51342 | + | 138353 - 139882 | 55835.7 |
| o-succinylhomoserine sulfhydrylase | M5M_RS00635 | P55218 | + | 139936 - 141120 | 41955.1 |
| moxr family atpase | M5M_RS00640 | P94474 | + | 141125 - 142036 | 33422.4 |
| hypothetical protein | M5M_RS00645 | Not Available | + | 142177 - 143025 | 31727.2 |
| duf58 domain-containing protein | M5M_RS00650 | Not Available | + | 143087 - 144061 | 36667.4 |
| duf3488 and transglutaminase-like domain-containing protein | M5M_RS00655 | Q9HZX3 | + | 144018 - 146114 | 79406.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.