Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4194 domain-containing protein | M5M_RS00510 | Not Available | + | 110699 - 111427 | 26985.3 |
| atp-binding protein | M5M_RS00515 | Not Available | + | 111430 - 115056 | 136221.0 |
| hypothetical protein | M5M_RS00520 | Not Available | + | 115361 - 115642 | 10633.8 |
| hypothetical protein | M5M_RS00525 | Not Available | - | 115717 - 116250 | 19910.2 |
| hpf/raia family ribosome-associated protein | M5M_RS00530 | Not Available | - | 116354 - 116716 | 13348.9 |
| hsp20 family protein | M5M_RS00535 | Q6CYV2 | + | 117019 - 117465 | 16793.9 |
| class i sam-dependent methyltransferase | M5M_RS00540 | Not Available | + | 117466 - 118104 | 24573.2 |
| glxa family transcriptional regulator | M5M_RS00545 | Q57HG8 | - | 118091 - 119077 | 37540.3 |
| beta-ketoacyl synthase | M5M_RS00550 | Q9HU15 | + | 119344 - 121275 | 69232.4 |
| tigr04219 family outer membrane beta-barrel protein | M5M_RS00555 | Not Available | - | 121362 - 122066 | 25273.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.