Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosome recycling factor | M5M_RS05310 | C5BQF9 | - | 1177352 - 1177909 | 20424.4 |
| ump kinase | M5M_RS05315 | A4VJS3 | - | 1177912 - 1178652 | 26564.5 |
| translation elongation factor ts | M5M_RS05320 | Q21HH3 | - | 1178779 - 1179654 | 30804.0 |
| 30s ribosomal protein s2 | M5M_RS05325 | B3PBP6 | - | 1179757 - 1180503 | 27342.0 |
| type i methionyl aminopeptidase | M5M_RS05330 | P0AE20 | + | 1180790 - 1181560 | 28067.9 |
| [protein-pii] uridylyltransferase | M5M_RS05335 | Q02RD0 | + | 1181560 - 1184253 | 103164.0 |
| succinyldiaminopimelate transaminase | M5M_RS05340 | Q3Z8H5 | + | 1184298 - 1185491 | 43988.6 |
| endonuclease iii | M5M_RS05345 | P39788 | + | 1185488 - 1186159 | 25332.9 |
| hypothetical protein | M5M_RS05350 | Not Available | - | 1186185 - 1186640 | 16496.9 |
| arsc family reductase | M5M_RS05355 | P44515 | + | 1186894 - 1187232 | 12889.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.