Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rdd family protein | M5M_RS04855 | Not Available | + | 1076125 - 1076571 | 16297.2 |
| hypothetical protein | M5M_RS04860 | Not Available | - | 1076581 - 1076766 | 7135.82 |
| m15 family metallopeptidase | M5M_RS04865 | Not Available | - | 1076794 - 1077834 | 38753.7 |
| outer membrane protein | M5M_RS19320 | Not Available | - | 1078126 - 1078800 | 25217.5 |
| abc transporter substrate-binding protein | M5M_RS04880 | Not Available | + | 1078900 - 1079655 | 28467.4 |
| fad-binding and (fe-s)-binding domain-containing protein | M5M_RS04885 | A0A0H3KZS3 | + | 1079724 - 1082732 | 111314.0 |
| thiamine pyrophosphate-binding protein | M5M_RS04890 | P51852 | - | 1082760 - 1084385 | 58503.4 |
| fad-dependent oxidoreductase | M5M_RS04895 | P42593 | - | 1084555 - 1086576 | 72974.7 |
| crotonase/enoyl-coa hydratase family protein | M5M_RS04900 | O35459 | - | 1086601 - 1087470 | 31772.1 |
| tetr/acrr family transcriptional regulator | M5M_RS04905 | Not Available | + | 1087566 - 1088177 | 22269.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.