Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | M5M_RS04800 | Q21KW2 | - | 1065417 - 1066472 | 38842.6 |
| Trna-leu | Not Available | Not Available | + | 1066998 - 1067084 | Not Available |
| duf885 family protein | M5M_RS04815 | Not Available | + | 1067286 - 1069157 | 70337.2 |
| aminotransferase class v-fold plp-dependent enzyme | M5M_RS04820 | Not Available | - | 1069243 - 1070529 | 46494.7 |
| marr family winged helix-turn-helix transcriptional regulator | M5M_RS04825 | Not Available | + | 1070714 - 1071193 | 17769.6 |
| homogentisate 1,2-dioxygenase | M5M_RS04830 | B2UJ73 | + | 1071252 - 1072553 | 48421.4 |
| fumarylacetoacetase | M5M_RS04835 | Q6H7M1 | + | 1072581 - 1073891 | 46904.0 |
| maleylacetoacetate isomerase | M5M_RS04840 | P57109 | + | 1073905 - 1074534 | 23072.0 |
| thiol peroxidase | M5M_RS04845 | P66953 | - | 1074568 - 1075065 | 16931.2 |
| adenylate/guanylate cyclase domain-containing protein | M5M_RS04850 | Not Available | + | 1075229 - 1076122 | 33169.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.