Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster assembly atpase sufc | M5M_RS04750 | P77499 | - | 1053232 - 1053987 | 27296.8 |
| fe-s cluster assembly protein sufb | M5M_RS04755 | Q55790 | - | 1054012 - 1055448 | 53277.1 |
| aminotransferase class v-fold plp-dependent enzyme | M5M_RS04760 | B1KNI3 | - | 1055509 - 1056657 | 40695.8 |
| fe-s cluster assembly transcriptional regulator iscr | M5M_RS04765 | O69219 | - | 1056654 - 1057139 | 17926.5 |
| trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmj | M5M_RS04770 | A0A0H2ZF87 | - | 1057241 - 1058032 | 29941.5 |
| inositol monophosphatase family protein | M5M_RS04775 | Q9HXI4 | + | 1058256 - 1059065 | 29440.5 |
| pas domain-containing hybrid sensor histidine kinase/response regulator | M5M_RS04780 | P26762 | - | 1059184 - 1061208 | 76727.2 |
| protein translocase subunit secf | M5M_RS04785 | E9RGS4 | - | 1061312 - 1062232 | 33132.6 |
| protein translocase subunit secd | M5M_RS04790 | Q9HXI1 | - | 1062243 - 1064117 | 67824.1 |
| trna guanosine(34) transglycosylase tgt | M5M_RS04795 | Q21KW1 | - | 1064271 - 1065398 | 41801.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.