Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase domain-containing protein | M5M_RS04650 | U2ZU49 | + | 1032243 - 1033292 | 38765.8 |
| 5s ribosomal rna | Not Available | Not Available | + | 1033976 - 1034091 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 1034278 - 1037164 | Not Available |
| Trna-ala | Not Available | Not Available | + | 1037477 - 1037552 | Not Available |
| Trna-ile | Not Available | Not Available | + | 1037782 - 1037858 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | + | 1037978 - 1039516 | Not Available |
| ribosome biogenesis gtpase der | M5M_RS04680 | B3PDM5 | - | 1040027 - 1041598 | 57717.2 |
| outer membrane protein assembly factor bamb | M5M_RS04685 | Q9HXJ7 | - | 1041676 - 1042866 | 43030.9 |
| tetratricopeptide repeat protein | M5M_RS04690 | P43989 | - | 1042866 - 1043534 | 23892.2 |
| histidine--trna ligase | M5M_RS04695 | A4VNX0 | - | 1043583 - 1044851 | 46818.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.