Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| vwa domain-containing protein | M5M_RS04600 | Not Available | + | 1019765 - 1020847 | 40819.2 |
| vwa domain-containing protein | M5M_RS04605 | Not Available | + | 1020844 - 1021854 | 38415.9 |
| hypothetical protein | M5M_RS04610 | Not Available | + | 1021882 - 1022550 | 24743.7 |
| hypothetical protein | M5M_RS04615 | Not Available | + | 1022547 - 1023194 | 23370.8 |
| m48 family metalloprotease | M5M_RS04620 | Not Available | + | 1023207 - 1024646 | 51909.6 |
| 3-(methylthio)propionyl-coa ligase | M5M_RS04625 | Q00594 | + | 1024755 - 1026386 | 60685.9 |
| hypothetical protein | M5M_RS04630 | Not Available | - | 1026461 - 1026895 | 15727.4 |
| duf4397 domain-containing protein | M5M_RS04635 | Not Available | - | 1027030 - 1028391 | 46239.3 |
| lysophospholipid acyltransferase family protein | M5M_RS04640 | Not Available | - | 1028598 - 1030310 | 64821.9 |
| s8 family serine peptidase | M5M_RS20950 | P00783 | - | 1030446 - 1032005 | 52487.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.