Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr substrate-binding domain-containing protein | M5M_RS04500 | P0ACR6 | + | 998407 - 999303 | 32867.6 |
| hypothetical protein | M5M_RS04505 | Not Available | - | 999288 - 999656 | 13972.8 |
| chaperonin groel | M5M_RS04510 | Not Available | - | 999809 - 1001437 | 57642.4 |
| co-chaperone groes | M5M_RS04515 | P26195 | - | 1001434 - 1001748 | 11170.4 |
| hypothetical protein | M5M_RS04520 | Not Available | + | 1001778 - 1002569 | 31185.2 |
| lrp/asnc family transcriptional regulator | M5M_RS04525 | P45265 | - | 1002600 - 1003082 | 18179.0 |
| na+/h+ antiporter nhac | M5M_RS04530 | P27611 | - | 1003079 - 1004605 | 53647.2 |
| pyridoxal phosphate-dependent aminotransferase | M5M_RS04535 | Q9HUI9 | - | 1004717 - 1005916 | 43070.7 |
| formyltetrahydrofolate deformylase | M5M_RS04540 | Q46339 | - | 1006048 - 1006911 | 32372.0 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | M5M_RS04545 | Q9HDV0 | + | 1007074 - 1007844 | 27521.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.