Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tryptophan halogenase family protein | M5M_RS04355 | Q8KHZ8 | - | 945938 - 947455 | 56411.0 |
| tonb-dependent receptor | M5M_RS04360 | Not Available | - | 947579 - 950236 | 95170.8 |
| hypothetical protein | M5M_RS04365 | Not Available | - | 950409 - 951266 | 31570.1 |
| filamentous hemagglutinin n-terminal domain-containing protein | M5M_RS04370 | Not Available | - | 951330 - 963866 | 419626.0 |
| shlb/fhac/hecb family hemolysin secretion/activation protein | M5M_RS04375 | Not Available | - | 963926 - 965914 | 73511.2 |
| bifunctional serine/threonine-protein kinase/formylglycine-generating enzyme family protein | M5M_RS04380 | Q8NU98 | - | 965921 - 968482 | 93386.0 |
| type vi secretion system-associated fha domain protein tagh | M5M_RS19310 | Not Available | + | 968864 - 970438 | 56126.3 |
| type vi secretion system lipoprotein tssj | M5M_RS04390 | Not Available | + | 970458 - 970961 | 18631.5 |
| type vi secretion system baseplate subunit tssk | M5M_RS04395 | Q9I753 | + | 971004 - 972329 | 49542.4 |
| type ivb secretion system protein icmh/dotu | M5M_RS04400 | Not Available | + | 972333 - 973154 | 30945.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.