Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | M5M_RS04305 | Not Available | - | 933190 - 934275 | 40714.0 |
| trna 5-hydroxyuridine modification protein yegq | M5M_RS04310 | P76403 | + | 934395 - 935705 | 49532.8 |
| nad(p)/fad-dependent oxidoreductase | M5M_RS04315 | Q5BLE8 | - | 935644 - 937311 | 61678.6 |
| padr family transcriptional regulator | M5M_RS04320 | P94443 | + | 937420 - 937974 | 20740.8 |
| glycerophosphodiester phosphodiesterase | M5M_RS04325 | O07592 | - | 938128 - 939003 | 31798.6 |
| acyltransferase family protein | M5M_RS04330 | Q3UDW8 | - | 939058 - 940128 | 40050.0 |
| sugar mfs transporter | M5M_RS04335 | Not Available | - | 940198 - 941544 | 48384.3 |
| beta-n-acetylhexosaminidase | M5M_RS04340 | P49008 | - | 941566 - 943938 | 87448.0 |
| n-acetylglucosamine kinase | M5M_RS04345 | Q9KUA9 | - | 943959 - 944855 | 30585.0 |
| duf6445 family protein | M5M_RS04350 | Not Available | + | 945234 - 945941 | 26565.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.