Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein | M5M_RS04205 | Not Available | - | 916141 - 916554 | 14240.8 |
| type ii secretion system protein | M5M_RS20945 | Not Available | - | 916573 - 917037 | 15392.3 |
| type ii secretion system protein | M5M_RS04215 | Not Available | - | 917281 - 917817 | 19799.7 |
| type ii secretion system f family protein | M5M_RS04220 | Q5SK58 | - | 917814 - 919037 | 45491.1 |
| gspe/pule family protein | M5M_RS04225 | Q1D098 | - | 919034 - 920773 | 64886.7 |
| lipopolysaccharide assembly protein lapb | M5M_RS04230 | Not Available | - | 920773 - 922200 | 51326.5 |
| exea family protein | M5M_RS04235 | P45754 | - | 922197 - 923105 | 32528.9 |
| pilus (msha type) biogenesis protein mshl | M5M_RS04240 | P35818 | - | 923108 - 924790 | 60496.2 |
| hypothetical protein | M5M_RS04245 | Not Available | - | 924810 - 925115 | 10554.9 |
| septum formation initiator family protein | M5M_RS04250 | Not Available | - | 925108 - 925767 | 24746.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.