Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptide-methionine (r)-s-oxide reductase msrb | M5M_RS04105 | B3PK10 | - | 899126 - 899536 | 15236.7 |
| pyridoxal phosphate-dependent aminotransferase | M5M_RS04110 | P0A960 | + | 899622 - 900839 | 45191.7 |
| hypothetical protein | M5M_RS04115 | Not Available | + | 900839 - 901303 | 17276.5 |
| class i sam-dependent methyltransferase | M5M_RS20645 | Q482P5 | - | 901266 - 902201 | 34602.5 |
| atp-nad kinase family protein | M5M_RS20650 | Not Available | - | 902198 - 903355 | 40827.2 |
| hypothetical protein | M5M_RS04130 | Not Available | + | 903443 - 903646 | 7450.44 |
| 4-phosphoerythronate dehydrogenase | M5M_RS04135 | B3PK14 | - | 903614 - 904756 | 41934.0 |
| 5'-3' exonuclease h3th domain-containing protein | M5M_RS04140 | Q9HT80 | - | 904761 - 905678 | 33490.0 |
| hypothetical protein | M5M_RS04145 | Not Available | + | 905946 - 906641 | 25715.6 |
| sulfurtransferase tusa | M5M_RS04150 | A6V7T5 | - | 906690 - 906959 | 9971.04 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.