Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| adenylate/guanylate cyclase domain-containing protein | M5M_RS04055 | P40137 | + | 891661 - 893022 | 50982.1 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | M5M_RS04060 | A9AFB4 | - | 893041 - 893880 | 31500.5 |
| abc transporter permease | M5M_RS04065 | P0AFN8 | - | 893960 - 894733 | 28357.3 |
| abc transporter atp-binding protein | M5M_RS04070 | P36879 | - | 894735 - 895658 | 33928.1 |
| pa2817 family protein | M5M_RS04075 | Not Available | + | 895731 - 896126 | 14928.5 |
| Trna-gly | Not Available | Not Available | + | 896531 - 896606 | Not Available |
| Trna-glu | Not Available | Not Available | + | 896610 - 896685 | Not Available |
| hypothetical protein | M5M_RS04090 | Not Available | + | 896918 - 897691 | 29299.9 |
| duf1499 domain-containing protein | M5M_RS04095 | Not Available | - | 897679 - 898425 | 26944.3 |
| dna-3-methyladenine glycosylase i | M5M_RS04100 | Not Available | - | 898455 - 899126 | 24761.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.