Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gluconokinase | M5M_RS04005 | Q5FQ97 | + | 880915 - 881406 | 18504.4 |
| abc transporter substrate-binding protein | M5M_RS04010 | O06875 | + | 881403 - 882659 | 46258.4 |
| carbohydrate abc transporter permease | M5M_RS04015 | O58968 | + | 882662 - 883570 | 33446.6 |
| carbohydrate abc transporter permease | M5M_RS04020 | O58967 | + | 883567 - 884424 | 31639.4 |
| abc transporter atp-binding protein | M5M_RS04025 | Q8FCQ2 | + | 884428 - 885495 | 38996.1 |
| gh1 family beta-glucosidase | M5M_RS04030 | P22073 | + | 885485 - 886807 | 49414.4 |
| lon protease family protein | M5M_RS04035 | P75867 | - | 886828 - 889206 | 88193.2 |
| Trna-ser | Not Available | Not Available | + | 889436 - 889523 | Not Available |
| nitroreductase | M5M_RS04045 | P0ACY2 | - | 889677 - 890231 | 20061.0 |
| hypothetical protein | M5M_RS04050 | Not Available | + | 890345 - 891502 | 43099.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.