Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| yebg family protein | M5M_RS03910 | Not Available | + | 857221 - 857508 | 10575.7 |
| outer membrane beta-barrel protein | M5M_RS03915 | Not Available | + | 857584 - 858120 | 19402.8 |
| tonb-dependent receptor | M5M_RS03920 | P46359 | - | 858218 - 860410 | 79102.7 |
| gntp family permease | M5M_RS03925 | P42314 | + | 860648 - 861949 | 45088.9 |
| putative d--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane | M5M_RS03930 | A1VUF3 | + | 861957 - 863978 | 72200.8 |
| pas domain-containing hybrid sensor histidine kinase/response regulator | M5M_RS03935 | Not Available | + | 863998 - 867393 | 124543.0 |
| response regulator transcription factor | M5M_RS03940 | A8R3T0 | - | 867476 - 868102 | 22648.4 |
| 3-hydroxybutyrate dehydrogenase | M5M_RS03945 | Q9X6U2 | - | 868144 - 868932 | 27155.5 |
| sensor histidine kinase kdpd | M5M_RS03950 | Not Available | - | 869009 - 869704 | 25737.9 |
| tetratricopeptide repeat-containing response regulator | M5M_RS03955 | Not Available | - | 869706 - 871358 | 62758.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.