Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycine zipper 2tm domain-containing protein | M5M_RS03855 | Not Available | - | 848209 - 848745 | 19666.1 |
| methyltransferase domain-containing protein | M5M_RS03860 | P36566 | - | 848818 - 849648 | 30797.0 |
| mazg-like family protein | M5M_RS03865 | Not Available | - | 849645 - 849956 | 11565.9 |
| giy-yig nuclease family protein | M5M_RS03870 | Q1C3N3 | + | 849955 - 850248 | 10983.0 |
| duf599 domain-containing protein | M5M_RS03875 | Not Available | - | 850205 - 850939 | 27388.5 |
| insulinase family protein | M5M_RS03880 | Q7ZVZ6 | + | 851103 - 854018 | 108627.0 |
| thioesterase family protein | M5M_RS03885 | Not Available | + | 854026 - 854421 | 14901.7 |
| fibronectin type iii domain-containing protein | M5M_RS20460 | Not Available | - | 854438 - 855418 | 34095.0 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | M5M_RS03900 | P37634 | + | 855655 - 856488 | 31399.5 |
| rlua family pseudouridine synthase | M5M_RS03905 | Q9CK02 | + | 856488 - 857132 | 24081.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.