Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| formimidoylglutamase | M5M_RS03805 | Q8XW30 | + | 839609 - 840616 | 36541.3 |
| sodium:alanine symporter family protein | M5M_RS03810 | O31464 | + | 840660 - 842087 | 50637.6 |
| ppx/gppa phosphatase family protein | M5M_RS03815 | Q9ZN70 | + | 842084 - 843559 | 54248.9 |
| helix-turn-helix domain-containing protein | M5M_RS03820 | Not Available | - | 843596 - 843943 | 12082.4 |
| aconitate hydratase 2 | M5M_RS19300 | Not Available | + | 843984 - 844661 | 25898.8 |
| had family phosphatase | M5M_RS03830 | O33513 | - | 844656 - 845315 | 24158.5 |
| atp-binding protein | M5M_RS03835 | Q9I4F8 | - | 845331 - 846701 | 50673.0 |
| response regulator transcription factor | M5M_RS03840 | Q9I4F9 | - | 846701 - 847372 | 25197.3 |
| pepsy domain-containing protein | M5M_RS03845 | Not Available | - | 847387 - 847638 | 8873.12 |
| hypothetical protein | M5M_RS20455 | Not Available | - | 847691 - 848182 | 20041.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.