Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| had-ia family hydrolase | M5M_RS03655 | P68910 | - | 804697 - 805353 | 24432.1 |
| 23s rrna pseudouridine(955/2504/2580) synthase rluc | M5M_RS03660 | Q9CM51 | - | 805344 - 806309 | 35799.0 |
| rne/rng family ribonuclease | M5M_RS03665 | P44443 | + | 806988 - 809801 | 105026.0 |
| Trna-ser | Not Available | Not Available | + | 810048 - 810135 | Not Available |
| bax inhibitor-1/ycca family protein | M5M_RS03675 | Q03268 | + | 810285 - 810947 | 23534.5 |
| sulfurtransferase complex subunit tusd | M5M_RS03680 | B5XN82 | + | 811006 - 811392 | 14075.8 |
| dsre family protein | M5M_RS03685 | Q9I0N2 | + | 811397 - 811744 | 12829.4 |
| hypothetical protein | M5M_RS03690 | Not Available | + | 811746 - 812018 | 9644.49 |
| tuse/dsrc/dsvc family sulfur relay protein | M5M_RS03695 | Q7N5Z1 | + | 812018 - 812332 | 11614.0 |
| secondary thiamine-phosphate synthase enzyme yjbq | M5M_RS03700 | P74125 | - | 812352 - 812759 | 15067.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.