Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit yajc | M5M_RS03555 | P57234 | - | 788874 - 789206 | 12264.2 |
| arac family transcriptional regulator | M5M_RS20610 | Not Available | - | 789291 - 790004 | 25979.4 |
| thioredoxin-dependent thiol peroxidase | M5M_RS03565 | P44411 | - | 790631 - 791095 | 17288.0 |
| malate dehydrogenase | M5M_RS03570 | C5BU70 | - | 791184 - 792164 | 35253.2 |
| dutp diphosphatase | M5M_RS03575 | Not Available | - | 792313 - 792939 | 23578.7 |
| tatd family hydrolase | M5M_RS03580 | P44718 | - | 792949 - 793728 | 28800.2 |
| pilz domain-containing protein | M5M_RS03585 | Not Available | - | 793819 - 794169 | 12463.2 |
| dna polymerase iii subunit delta' | M5M_RS03590 | P52024 | - | 794226 - 795224 | 36176.1 |
| rlua family pseudouridine synthase | M5M_RS03595 | Q8ZIK1 | + | 795289 - 795945 | 24533.7 |
| dtmp kinase | M5M_RS03600 | C5BU64 | - | 795961 - 796587 | 22864.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.