Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| signal recognition particle protein | M5M_RS03460 | P0AGD9 | - | 766879 - 768258 | 49733.3 |
| inner membrane protein ypjd | M5M_RS03465 | P45674 | + | 768427 - 769233 | 29294.7 |
| hlyc/corc family transporter | M5M_RS03470 | P37908 | + | 769303 - 770589 | 47819.0 |
| duf1289 domain-containing protein | M5M_RS19820 | Not Available | - | 770594 - 770779 | 7043.43 |
| gamma carbonic anhydrase family protein | M5M_RS03475 | P40882 | - | 770776 - 771306 | 18554.4 |
| coa pyrophosphatase | M5M_RS03480 | B7LPN4 | - | 771330 - 771938 | 22673.1 |
| duf3135 domain-containing protein | M5M_RS03485 | Not Available | + | 772058 - 772384 | 12069.5 |
| nudix hydrolase | M5M_RS03490 | P93740 | + | 772371 - 772916 | 20980.9 |
| yqfo family protein | M5M_RS03495 | P0A657 | - | 772921 - 773232 | 11190.4 |
| 3-phosphoglycerate dehydrogenase family protein | M5M_RS03500 | P43885 | - | 773233 - 774405 | 42059.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.