Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | M5M_RS03410 | Not Available | + | 759141 - 759491 | 12781.8 |
| acyl-coa thioesterase | M5M_RS03415 | P0A0Q8 | - | 759482 - 759937 | 16838.4 |
| threonine synthase | M5M_RS03420 | P29363 | - | 759983 - 761377 | 50802.9 |
| homoserine dehydrogenase | M5M_RS03425 | P29365 | - | 761402 - 762706 | 45780.4 |
| dsbc family protein | M5M_RS03430 | P0AEG7 | - | 762874 - 763638 | 26993.0 |
| site-specific tyrosine recombinase xerd | M5M_RS03435 | Q9HXQ6 | - | 763729 - 764592 | 32236.2 |
| 50s ribosomal protein l19 | M5M_RS03440 | C1DSZ9 | - | 764671 - 765021 | 13067.9 |
| trna (guanosine(37)-n1)-methyltransferase trmd | M5M_RS03445 | Q3KHJ2 | - | 765073 - 765873 | 29559.1 |
| ribosome maturation factor rimm | M5M_RS03450 | B3PDH6 | - | 765882 - 766421 | 20206.0 |
| 30s ribosomal protein s16 | M5M_RS03455 | A6W1U2 | - | 766445 - 766693 | 9256.04 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.