Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hdod domain-containing protein | M5M_RS03360 | Not Available | + | 747215 - 748051 | 30415.7 |
| uracil-dna glycosylase | M5M_RS03365 | Q02HQ1 | - | 748053 - 748745 | 25427.3 |
| lysine--trna ligase | M5M_RS03370 | C5BRM0 | - | 748802 - 750292 | 56435.0 |
| peptide chain release factor 2 | M5M_RS03375 | A1JPL5 | - | 750313 - 751408 | 40627.2 |
| permease | M5M_RS03380 | Not Available | - | 751508 - 752689 | 41896.0 |
| merr family transcriptional regulator | M5M_RS03385 | Q8XD09 | - | 752682 - 753089 | 15196.2 |
| abc transporter permease | M5M_RS03390 | Not Available | - | 753175 - 755664 | 90294.9 |
| abc transporter atp-binding protein | M5M_RS03395 | P0A9T9 | - | 755658 - 756374 | 25514.6 |
| arylesterase | M5M_RS03400 | Q9HZY8 | + | 756466 - 757071 | 21575.2 |
| single-stranded-dna-specific exonuclease recj | M5M_RS03405 | P39693 | - | 757053 - 758774 | 62469.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.