Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nucleoside triphosphate pyrophosphohydrolase | M5M_RS03265 | P0AEY4 | - | 725685 - 726485 | 29882.4 |
| gtp diphosphokinase | M5M_RS03270 | P0AG22 | - | 726482 - 728728 | 84121.7 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | M5M_RS03275 | Q57KF9 | - | 728747 - 730087 | 49443.2 |
| cysteine synthase cysm | M5M_RS03280 | Q9I526 | - | 730084 - 730992 | 32177.7 |
| response regulator | M5M_RS03285 | Not Available | + | 731132 - 733936 | 103937.0 |
| dna repair protein reco | M5M_RS03290 | Q608M9 | - | 733926 - 734639 | 26385.0 |
| gtpase era | M5M_RS03295 | A4XSC5 | - | 734636 - 735523 | 33342.6 |
| ribonuclease iii | M5M_RS03300 | Q2SL32 | - | 735516 - 736190 | 24803.6 |
| duf4845 domain-containing protein | M5M_RS03305 | Not Available | - | 736192 - 736617 | 16293.0 |
| signal peptidase i | M5M_RS03310 | Q9I5G7 | - | 736638 - 737477 | 31583.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.