Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| malate synthase g | M5M_RS03165 | A6UYU5 | - | 705095 - 707269 | 78237.5 |
| lysr family transcriptional regulator | M5M_RS03170 | Not Available | - | 707406 - 708356 | 35735.2 |
| isocitrate lyase | M5M_RS03175 | Q9I0K4 | + | 708611 - 710206 | 59111.9 |
| ribonuclease e activity regulator rraa | M5M_RS03180 | Q8PIT8 | - | 710387 - 710878 | 17622.3 |
| rieske (2fe-2s) protein | M5M_RS03185 | Not Available | - | 710960 - 711271 | 11444.0 |
| hypothetical protein | M5M_RS19290 | Not Available | - | 711273 - 711617 | 13269.9 |
| alpha/beta fold family hydrolase | M5M_RS03190 | Not Available | - | 711595 - 712200 | 21877.0 |
| aminodeoxychorismate synthase component i | M5M_RS03200 | P12679 | + | 712485 - 713855 | 50788.2 |
| phosphoadenylyl-sulfate reductase | M5M_RS03205 | B7VBC3 | + | 714186 - 714911 | 27564.7 |
| hypothetical protein | M5M_RS03210 | Not Available | + | 714927 - 715262 | 12398.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.