Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent isocitrate dehydrogenase | M5M_RS03115 | Q02NB5 | - | 696398 - 697657 | 45539.8 |
| pseudouridine synthase | M5M_RS03120 | Q9HX48 | + | 697783 - 698385 | 22499.2 |
| nudix hydrolase | M5M_RS03125 | Not Available | + | 698382 - 698834 | 16699.7 |
| trna 2-thiouridine(34) synthase mnma | M5M_RS03130 | A6W0E1 | + | 698794 - 699963 | 43358.7 |
| high frequency lysogenization protein hfld | M5M_RS03135 | C5BU85 | + | 699956 - 700585 | 23465.3 |
| adenylosuccinate lyase | M5M_RS03140 | Q9I0K9 | + | 700652 - 702016 | 50330.8 |
| cupin domain-containing protein | M5M_RS03145 | P27431 | + | 702066 - 703217 | 43590.3 |
| gnat family n-acetyltransferase | M5M_RS03150 | Not Available | + | 703246 - 703677 | 16018.2 |
| hypothetical protein | M5M_RS03155 | Not Available | + | 703689 - 704234 | 20604.5 |
| nolw domain-containing protein | M5M_RS03160 | Not Available | + | 704246 - 705061 | 29076.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.