Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| replication-associated recombination protein a | M5M_RS03065 | P45262 | - | 685806 - 687155 | 49849.3 |
| outer membrane lipoprotein chaperone lola | M5M_RS03070 | A6V4H3 | - | 687148 - 687807 | 23827.5 |
| dna translocase ftsk | M5M_RS03075 | Q9I0M3 | - | 687817 - 690147 | 84078.4 |
| thioredoxin-disulfide reductase | M5M_RS03080 | Q9KSS4 | + | 690377 - 691324 | 33807.1 |
| leucyl/phenylalanyl-trna--protein transferase | M5M_RS03085 | Q5P1A7 | + | 691356 - 692045 | 25984.4 |
| arginyltransferase | M5M_RS03090 | B3PL52 | + | 692056 - 692760 | 27018.2 |
| translation initiation factor if-1 | M5M_RS03095 | Q21K31 | + | 692856 - 693074 | 8284.13 |
| atp-dependent clp protease atp-binding subunit clpa | M5M_RS03100 | P0ABI1 | - | 693127 - 695412 | 83791.6 |
| atp-dependent clp protease adapter clps | M5M_RS03105 | A4XUY4 | - | 695424 - 695807 | 14116.8 |
| cold shock domain-containing protein cspd | M5M_RS03110 | P0A970 | + | 696115 - 696366 | 8792.31 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.