Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| response regulator | M5M_RS03020 | Q9F8D7 | - | 676836 - 679037 | 82550.7 |
| rna polymerase sigma factor | M5M_RS03025 | Not Available | + | 679175 - 679693 | 19609.5 |
| hypothetical protein | M5M_RS03030 | Not Available | + | 679690 - 680049 | 13424.9 |
| hypothetical protein | M5M_RS20300 | Not Available | + | 680078 - 680254 | 6346.22 |
| duf3106 domain-containing protein | M5M_RS03035 | Not Available | + | 680247 - 680756 | 20215.4 |
| hypothetical protein | M5M_RS03040 | Not Available | - | 680763 - 680999 | 8941.69 |
| methyl-accepting chemotaxis protein | M5M_RS03045 | Not Available | - | 681028 - 682647 | 58591.3 |
| siroheme synthase cysg | M5M_RS03050 | A4XUX3 | - | 682747 - 684129 | 50322.9 |
| serine--trna ligase | M5M_RS03055 | C5BIK4 | - | 684129 - 685406 | 47625.6 |
| fluoride efflux transporter crcb | M5M_RS03060 | Q2SJB9 | - | 685435 - 685809 | 13596.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.