Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent endonuclease | M5M_RS02975 | Not Available | + | 659927 - 661879 | 73386.2 |
| uvrd-helicase domain-containing protein | M5M_RS02980 | Not Available | + | 661880 - 663760 | 70491.8 |
| hypothetical protein | M5M_RS02985 | Not Available | + | 663779 - 665116 | 51924.1 |
| hypothetical protein | M5M_RS20060 | Not Available | - | 666089 - 667951 | 69289.0 |
| hypothetical protein | M5M_RS02990 | Not Available | + | 668749 - 668979 | 8739.81 |
| site-specific integrase | M5M_RS02995 | Not Available | - | 669099 - 669872 | 28658.8 |
| hypothetical protein | M5M_RS03000 | Not Available | - | 670362 - 670595 | 8695.49 |
| nadp-dependent isocitrate dehydrogenase | M5M_RS03005 | P41561 | - | 671155 - 673389 | 81810.1 |
| carboxy terminal-processing peptidase | M5M_RS03010 | P43669 | + | 673866 - 675965 | 78769.1 |
| exodeoxyribonuclease iii | M5M_RS03015 | P44318 | + | 676027 - 676839 | 30760.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.