Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M5M_RS20600 | Not Available | + | 649858 - 650052 | 7079.72 |
| sprt-like domain-containing protein | M5M_RS02935 | Not Available | - | 650265 - 651065 | 29910.8 |
| tn3 family transposase | M5M_RS02940 | Not Available | + | 651297 - 654392 | 115976.0 |
| helix-turn-helix domain-containing protein | M5M_RS19815 | Not Available | - | 654361 - 654597 | 8612.44 |
| hypothetical protein | M5M_RS02945 | Not Available | + | 654727 - 655251 | 19239.7 |
| dead/deah box helicase | M5M_RS02950 | O33011 | + | 655248 - 656612 | 49513.4 |
| had family hydrolase | M5M_RS02955 | Not Available | - | 656751 - 657383 | 23231.9 |
| tyrosine-type recombinase/integrase | M5M_RS02960 | P18021 | + | 657637 - 658374 | 27589.7 |
| hypothetical protein | M5M_RS02965 | Not Available | + | 658422 - 658724 | 10857.0 |
| endonuclease/exonuclease/phosphatase family protein | M5M_RS02970 | O42446 | + | 658721 - 659758 | 37764.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.