Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cation transporter | M5M_RS02890 | Not Available | + | 639590 - 640225 | 22593.9 |
| hypothetical protein | M5M_RS02895 | Not Available | + | 640349 - 640708 | 13013.5 |
| tolc family protein | M5M_RS02900 | Not Available | + | 640793 - 642133 | 48810.2 |
| efflux rnd transporter periplasmic adaptor subunit | M5M_RS02905 | P94176 | + | 642130 - 643071 | 34150.3 |
| efflux rnd transporter permease subunit | M5M_RS02910 | P94177 | + | 643155 - 646295 | 112570.0 |
| nitrogen regulatory protein p-ii | M5M_RS20580 | Not Available | + | 646372 - 646548 | 6345.69 |
| cation diffusion facilitator family transporter | M5M_RS02920 | Q6D7E5 | + | 646760 - 647641 | 32613.6 |
| abc transporter transmembrane domain-containing protein | M5M_RS20930 | O50655 | - | 648321 - 649060 | 27761.9 |
| hypothetical protein | M5M_RS20590 | Not Available | + | 649128 - 649283 | 5795.83 |
| hypothetical protein | M5M_RS20595 | Not Available | + | 649311 - 649607 | 11675.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.