Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M5M_RS02840 | Not Available | + | 631487 - 631852 | 13690.1 |
| duf5676 family membrane protein | M5M_RS02845 | Not Available | + | 631899 - 632150 | 9182.71 |
| duf4440 domain-containing protein | M5M_RS02850 | Not Available | - | 632333 - 632797 | 17100.5 |
| cytochrome c | M5M_RS02855 | Not Available | - | 632822 - 633412 | 21721.8 |
| hypothetical protein | M5M_RS02860 | Not Available | - | 633436 - 633735 | 10951.1 |
| copper resistance protein b | M5M_RS02865 | P12375 | - | 633791 - 634654 | 31753.1 |
| copper resistance system multicopper oxidase | M5M_RS02870 | Q47452 | - | 634651 - 636489 | 68010.2 |
| heavy metal response regulator transcription factor | M5M_RS02875 | P0AD00 | + | 636700 - 637377 | 25458.0 |
| heavy metal sensor histidine kinase | M5M_RS02880 | Q8FK37 | + | 637382 - 638797 | 52691.6 |
| merr family transcriptional regulator | M5M_RS02885 | Q9X5V4 | - | 639055 - 639522 | 18125.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.