Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M5M_RS20565 | Not Available | - | 624115 - 624336 | 8137.03 |
| merr family transcriptional regulator | M5M_RS02810 | P0ACS6 | + | 626126 - 626536 | 15835.1 |
| heavy-metal-associated domain-containing protein | M5M_RS19795 | Not Available | + | 626539 - 626859 | 10849.9 |
| heavy metal translocating p-type atpase | M5M_RS02815 | Q8ZR95 | + | 626889 - 629234 | 82649.3 |
| cupredoxin domain-containing protein | M5M_RS02820 | Not Available | + | 629272 - 629625 | 13272.4 |
| p-ii family nitrogen regulator | M5M_RS19800 | Not Available | + | 629757 - 630002 | 9321.95 |
| duf2933 domain-containing protein | M5M_RS20920 | Not Available | + | 630011 - 630295 | 10609.6 |
| isoprenylcysteine carboxylmethyltransferase family protein | M5M_RS02830 | Not Available | + | 630322 - 630975 | 25025.6 |
| hypothetical protein | M5M_RS20575 | Not Available | + | 630986 - 631180 | 7067.77 |
| hypothetical protein | M5M_RS20925 | Not Available | + | 631177 - 631311 | 5372.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.