Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | M5M_RS19285 | Q57022 | + | 600445 - 603315 | 107226.0 |
| sulfotransferase family 2 domain-containing protein | M5M_RS02715 | Not Available | + | 603328 - 604275 | 36200.3 |
| nucleoside-diphosphate sugar epimerase/dehydratase | M5M_RS02720 | P39853 | - | 604299 - 606251 | 71352.9 |
| glycosyltransferase family 4 protein | M5M_RS02725 | Not Available | - | 606205 - 607218 | 36310.1 |
| nad-dependent epimerase/dehydratase family protein | M5M_RS02730 | Q56623 | - | 607212 - 608150 | 34510.7 |
| rep-associated tyrosine transposase | M5M_RS02735 | Not Available | + | 608305 - 608745 | 16907.2 |
| Trna-val | Not Available | Not Available | + | 609055 - 609131 | Not Available |
| threonine--trna ligase | M5M_RS02745 | Q21KE0 | + | 609330 - 611246 | 72606.5 |
| translation initiation factor if-3 | M5M_RS02750 | B1J6U5 | + | 611361 - 611921 | 20750.5 |
| 50s ribosomal protein l35 | M5M_RS02755 | Q21KD8 | + | 611985 - 612179 | 7334.15 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.