Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s1 | M5M_RS02560 | Q9HZ71 | + | 569222 - 570904 | 61552.0 |
| integration host factor subunit beta | M5M_RS02565 | C5BSK5 | + | 571230 - 571526 | 11259.5 |
| lapa family protein | M5M_RS02570 | Not Available | + | 571535 - 571807 | 9837.43 |
| tetratricopeptide repeat protein | M5M_RS02575 | P0AB60 | + | 571815 - 572996 | 44141.5 |
| orotidine-5'-phosphate decarboxylase | M5M_RS02580 | B1JKQ0 | + | 573217 - 573921 | 24766.1 |
| sulfate adenylyltransferase subunit cysd | M5M_RS02585 | Q21IS4 | + | 574175 - 575086 | 35029.1 |
| sulfate adenylyltransferase subunit cysn | M5M_RS02590 | B3PII1 | + | 575181 - 576599 | 52082.7 |
| glycosyltransferase family 2 protein | M5M_RS02595 | P55465 | + | 576669 - 578411 | 63971.1 |
| glycosyltransferase | M5M_RS02600 | Not Available | + | 578457 - 579338 | 33063.8 |
| glycosyltransferase family 2 protein | M5M_RS02605 | P37782 | + | 579341 - 580204 | 32248.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.