Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | M5M_RS02505 | A4VLX7 | - | 556191 - 556910 | 26410.5 |
| trz/atz family hydrolase | M5M_RS02510 | Q21IS0 | - | 556907 - 558235 | 47990.8 |
| dna gyrase subunit a | M5M_RS02515 | P48372 | + | 558507 - 561068 | 94463.2 |
| prephenate dehydratase | M5M_RS02520 | P27603 | + | 561094 - 562203 | 41011.8 |
| adenylyl-sulfate kinase | M5M_RS02525 | A1U3X8 | + | 562204 - 562821 | 22636.0 |
| bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase | M5M_RS02530 | Q608S5 | + | 562818 - 565040 | 78032.0 |
| phosphomannomutase/phosphoglucomutase | M5M_RS02535 | P37755 | + | 565087 - 566442 | 49600.1 |
| utp--glucose-1-phosphate uridylyltransferase galu | M5M_RS02540 | Q2FE05 | + | 566590 - 567468 | 31974.5 |
| abc transporter transmembrane domain-containing protein | M5M_RS02545 | Not Available | + | 567876 - 568100 | 7826.43 |
| (d)cmp kinase | M5M_RS02550 | A0KJ92 | + | 568381 - 569052 | 23978.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.