Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis response regulator protein-glutamate methylesterase | M5M_RS02455 | Q88EW5 | + | 548834 - 549796 | 34395.0 |
| flagellar motor protein | M5M_RS02460 | P28611 | + | 549800 - 550546 | 26542.6 |
| flagellar motor protein motd | M5M_RS02465 | P39064 | + | 550549 - 551532 | 36284.1 |
| para family protein | M5M_RS02470 | P37522 | + | 551534 - 552322 | 28830.2 |
| chemotaxis protein chew | M5M_RS02475 | Not Available | + | 552319 - 553212 | 33091.3 |
| chemotaxis protein chew | M5M_RS02480 | Not Available | + | 553304 - 553789 | 17695.1 |
| duf2802 domain-containing protein | M5M_RS02485 | Not Available | + | 553791 - 554234 | 16044.0 |
| hypothetical protein | M5M_RS02490 | Not Available | + | 554234 - 554755 | 19335.0 |
| ycik family oxidoreductase | M5M_RS02495 | P31808 | - | 554763 - 555518 | 27016.1 |
| had family hydrolase | M5M_RS02500 | Q9HZ62 | - | 555515 - 556198 | 24480.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.