Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| stas domain-containing protein | M5M_RS02355 | Q02QI1 | + | 529044 - 529349 | 10988.1 |
| fused response regulator/phosphatase | M5M_RS02360 | P28835 | + | 529362 - 531077 | 63441.1 |
| hpt domain-containing protein | M5M_RS02365 | Not Available | + | 531096 - 531428 | 12053.2 |
| flagellar hook-length control protein flik | M5M_RS19275 | Not Available | + | 531591 - 533018 | 49835.9 |
| flagellar basal body-associated flil family protein | M5M_RS02375 | O67712 | + | 533228 - 533737 | 18397.7 |
| flagellar motor switch protein flim | M5M_RS02380 | Q51465 | + | 533746 - 534744 | 37458.8 |
| flagellar motor switch protein flin | M5M_RS02385 | Q51466 | + | 534771 - 535205 | 15682.4 |
| flagellar biosynthetic protein flio | M5M_RS02390 | Not Available | + | 535303 - 535608 | 10720.6 |
| flagellar type iii secretion system pore protein flip | M5M_RS02395 | Q51468 | + | 535608 - 536375 | 27808.1 |
| flagellar biosynthetic protein fliq | M5M_RS02400 | P34201 | + | 536377 - 536649 | 9738.46 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.