Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-54 dependent transcriptional regulator | M5M_RS02305 | G3XCV0 | + | 518258 - 519691 | 53830.9 |
| pas domain-containing sensor histidine kinase | M5M_RS02310 | Q9I4N4 | + | 519965 - 521185 | 44622.6 |
| sigma-54 dependent transcriptional regulator | M5M_RS02315 | Q9I4N3 | + | 521178 - 522593 | 51235.4 |
| pa3496 family putative envelope integrity protein | M5M_RS02320 | Not Available | + | 522795 - 522983 | 7313.63 |
| flagellar hook-basal body complex protein flie | M5M_RS02325 | B3PEY6 | + | 523163 - 523528 | 13691.5 |
| flagellar basal-body ms-ring/collar protein flif | M5M_RS02330 | Q51463 | + | 523540 - 525225 | 61073.4 |
| flagellar motor switch protein flig | M5M_RS02335 | Q51464 | + | 525222 - 526262 | 37691.5 |
| flagellar assembly protein flih | M5M_RS19265 | Not Available | + | 526278 - 527081 | 29281.2 |
| flagellar protein export atpase flii | M5M_RS02345 | Q9I4N1 | + | 527071 - 528426 | 47764.1 |
| flagellar export protein flij | M5M_RS19270 | Not Available | + | 528423 - 528851 | 16641.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.