Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M5M_RS20055 | Not Available | - | 473796 - 474056 | 9981.05 |
| sodium/proton antiporter nhab | M5M_RS02110 | Q21J49 | - | 474120 - 475613 | 53795.2 |
| hypothetical protein | M5M_RS02115 | Q9I2S3 | + | 475932 - 477644 | 61696.2 |
| nad(+) diphosphatase | M5M_RS02120 | Q4KBL2 | + | 477662 - 478483 | 30893.7 |
| hypothetical protein | M5M_RS02125 | Not Available | + | 478534 - 479187 | 24295.4 |
| protease sohb | M5M_RS02130 | P0AG14 | + | 479232 - 480323 | 40246.2 |
| cation:proton antiporter | M5M_RS02135 | P39830 | - | 480405 - 481571 | 42540.6 |
| duf934 domain-containing protein | M5M_RS02140 | Not Available | - | 481684 - 482178 | 18340.9 |
| nitrite/sulfite reductase | M5M_RS02145 | Q73YC1 | - | 482162 - 483826 | 61792.0 |
| marr family winged helix-turn-helix transcriptional regulator | M5M_RS02150 | Not Available | + | 484464 - 484943 | 18219.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.